WebbThere are 6264 ProDom entries linked to 1462 Pfam-A entries (v 4.0), ... RECENT ProDom IMPROVEMENTS Accession numbers Each ProDom entry now has a unique and stable accession number ... WebbProDom-CG, has been derived as ... 700,000 entries in April 2002 and this figure is increasing exponentially. ... in order to limit the number of false positives, a stringent …
Protein Databases - SlideShare
Webb1 jan. 2005 · Each family is identified by a unique accession number, which is followed across successive ProDom releases using the MatchDom program ( 7). Links among … Webb1 jan. 1999 · Abstract The ProDom database contains protein domain families generated from the SWISS-PROT database by automated sequence comparisons. The current version was built with a new improved procedure based on recursive PSI-BLAST homology searches. ProDom can be searched on the World Wide Web to study domain … the ultimate party playlist
ProDom and ProDom-CG: tools for protein domain analysis and …
Webb1998 had 17 777 entries with at least two sequence segments in the alignment. Domo is another automatically clustered collection of pro-tein families which tries to group sequences that share mul-tiple modules into a single entry (Gracy and Argos, 1998). Like ProDom, a Domo entry is represented by a gapped mul-tiple alignment. WebbEach InterPro entry includes a functional description, annotation, literature references and links back to the relevant member database(s). Release 2.0 of InterPro (October 2000) contains over 3000 entries, representing families, domains, repeats and sites of post-translational modification encoded by a total of 6804 different regular expressions, … WebbProtein family annotation {ProDom entry} HTML: ProDom accession number: PD000023: Sequence alignment (protein) {ProDom family alignment} HTML: ProDom accession number: PD000023: Phylogenetic tree: HTML: ProDom accession number: PD000023: Sequence features (motifs) {ProDom domain image} the ultimate overclocking tool